Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/90a6dc7c0465cf7084976b9df32a02d5d6421843content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 90a6dc7c0465cf7084976b9df32a02d5d6421843
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGAGCAAAGGGTGGAT-2013_C01, GTAAGGTCAGAACCGA-2013_C01, TGTTACTTCGGGATTT-2013_C01, CATGCATAGCGATAGA-2013_C01, GTTCTTGTCGTTTCCA-2013_C01 (top 5 of 4742 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
90a6dc7c0465cf7084976b9df32a02d5d6421843.gz 2.13 GB 580064085c4092ad36cb84cfda38e594
90a6dc7c0465cf7084976b9df32a02d5d6421843.gz.tbi 1.1 MB 84422f1c763640fc67abfd366ebf82b5
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB a93e1cc2d47457d931b667a0549ca66b
statistics/