Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/92b9736cd78009eab1ad2c099d3c0809edbdf958content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 92b9736cd78009eab1ad2c099d3c0809edbdf958
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TCCGGTTTCACAGACT-2245_B02, TCATGAGGTAGCTGGT-2245_B02, CATAAGCTCCGTTAAA-2245_B02, ATTTAGCCAGGCGATA-2245_B02, GTTCACCTCATGCAAC-2245_B02 (top 5 of 8957 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
92b9736cd78009eab1ad2c099d3c0809edbdf958.gz 4.51 GB 115d16a5811b8507c6bdf1abd6674756
92b9736cd78009eab1ad2c099d3c0809edbdf958.gz.tbi 1.61 MB 3f52f30d087ec0221510ad67afa0f72c
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 2233634b133d999a0cefc04620bd47a8
statistics/