Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/932feda2d5a50b3615ef62c6a424658f12b95238content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 932feda2d5a50b3615ef62c6a424658f12b95238
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TAAGCTATCATGCTCC-2377_A07, CTGACCAAGCATCCAG-2377_A07, TCATGAGGTTACTTGC-2377_A07, GGTACTTAGGTGAAAT-2377_A07, GTGATCAGTCCTTCAG-2377_A07 (top 5 of 4189 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
932feda2d5a50b3615ef62c6a424658f12b95238.gz 1.99 GB a6e6f8d168c3c5aa647b3f4ed29c01cf
932feda2d5a50b3615ef62c6a424658f12b95238.gz.tbi 1.05 MB e85ba0c9e09fd1245f70cfaedd20ccce
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB f997845f5924b25e824afa048548fb8d
statistics/