Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/93c6ec45bd2a1ca18516918a7f1a448e84006372content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 93c6ec45bd2a1ca18516918a7f1a448e84006372
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GGGCTAACATTGTTGG-2305_C01, AGTGTGGCAATAACCT-2305_C01, TACGCACCAGCGCTTG-2305_C01, CGGAGCAAGCTGCACA-2305_C01, CCGGTTAAGGCACAGG-2305_C01 (top 5 of 7642 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
93c6ec45bd2a1ca18516918a7f1a448e84006372.gz 3.0 GB 27d8d46a366ff536da2fbd6d118ff51e
93c6ec45bd2a1ca18516918a7f1a448e84006372.gz.tbi 1.32 MB 9009544a1392bcfe969beef32c3783b3
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 604d176a27c392b4f7c82d58e1d68ac0
statistics/