Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/9435783e830866eb0c46d1736de4b6cdf0ba21a3content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 9435783e830866eb0c46d1736de4b6cdf0ba21a3
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GATTAAGCATCCTAGA-822_B01, TGGCTAAGTTACTTCA-822_B01, CTAGTGAGTTGTCATC-822_B01, GCCTATTGTTCGGTAA-822_B01, CTACGAAGTGTTGCTT-822_B01 (top 5 of 4553 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
9435783e830866eb0c46d1736de4b6cdf0ba21a3.gz 1.39 GB 40cffd48fc413dadd10db373f77d66f4
9435783e830866eb0c46d1736de4b6cdf0ba21a3.gz.tbi 899.97 KB 285e0c250d3b1aca79601a98554b88d1
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 1ebcb16535648d8908dca624df6d3293
statistics/