Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/94f3fc7c958add0b8d400fe60e8b89b634c86d07content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 94f3fc7c958add0b8d400fe60e8b89b634c86d07
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ACTTGTCGTGTTTGAG-2314_F02, CTTGTTCCATAAGTCT-2314_F02, GCTTGACCATGTTGCA-2314_F02, TGAGTGAAGTAGCGCC-2314_F02, CGGATTAGTTTGGGTA-2314_F02 (top 5 of 1590 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
94f3fc7c958add0b8d400fe60e8b89b634c86d07.gz 788.96 MB 7938ea9e40686ef680775bd26ed0b567
94f3fc7c958add0b8d400fe60e8b89b634c86d07.gz.tbi 711.65 KB 4959b4b838fd75ca9ba9b7ce891f5294
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 05a4d249c295d8ba0803f132fa99b019
statistics/