Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/99c5541784f21a3a3c4139e27763959772a6b050content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 99c5541784f21a3a3c4139e27763959772a6b050
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CCGATGCAGTGCACGC-2269_1_F06, TAGAGCCGTAACTACG-2269_1_F06, TAACCAGGTATTGTGG-2269_1_F06, TATTAGGTCTTGTTCG-2269_1_F06, CGGACCTAGGCTACTG-2269_1_F06 (top 5 of 6015 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
99c5541784f21a3a3c4139e27763959772a6b050.gz 2.91 GB b15f03fc6e0b5b2629b6c0780e5eae3a
99c5541784f21a3a3c4139e27763959772a6b050.gz.tbi 1.31 MB 7ee844feb71f6c0db0e60f35e8acf03d
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB d5175b539798c4f465de65f894098ded
statistics/