Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/9ac12a6b2dd7e9d3556cb4019656f74cc9749675content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 9ac12a6b2dd7e9d3556cb4019656f74cc9749675
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GAAGGCTAGCAAGGTA-2349_C08, TACTGGCCAACCTAAT-2349_C08, GCCATGATCTGCAAGT-2349_C08, GAGCAAATCAGGCCTA-2349_C08, GCAAGTGCACTGACTA-2349_C08 (top 5 of 4133 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
9ac12a6b2dd7e9d3556cb4019656f74cc9749675.gz 1.37 GB 17cd58aa53369fc7ca245b8e15dc22f8
9ac12a6b2dd7e9d3556cb4019656f74cc9749675.gz.tbi 890.22 KB 3eab2d615ebe133f0d7670f5b1894f58
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 09c7c18933297f984f3ea2311189292b
statistics/