Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/9df076b587ec0d9bfbd6e52976ebccfad78972a7content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 9df076b587ec0d9bfbd6e52976ebccfad78972a7
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CTCCTGAGTGTTTGCT-2459_B05, ATCCCGCGTAACGGGA-2459_B05, GGCTAGTGTTGGCGTG-2459_B05, GCTAGTGTCCTTAGGG-2459_B05, GCAGGAAGTTCGCTTG-2459_B05 (top 5 of 4282 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
9df076b587ec0d9bfbd6e52976ebccfad78972a7.gz 2.18 GB ef5312876a49756bed688935ef0020ca
9df076b587ec0d9bfbd6e52976ebccfad78972a7.gz.tbi 1.1 MB a5855aa60dcab271bb7d8d98b4398c2c
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 1447ab5ab2377eaa47c30312cacd01c0
statistics/