Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/a26d08904b8a440c93694baea94a094ccddb0474content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: a26d08904b8a440c93694baea94a094ccddb0474
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GGAGCAAGTCATGCCC-2370_C03, TGTCCTTCACGGTTTA-2370_C03, CTGGTCAAGAAGGTGC-2370_C03, GCTGTACCATAGCAGG-2370_C03, TTACGTTTCTAGCGTG-2370_C03 (top 5 of 4911 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
a26d08904b8a440c93694baea94a094ccddb0474.gz 2.89 GB 50e97d99202859d8f12bcb6b82cea975
a26d08904b8a440c93694baea94a094ccddb0474.gz.tbi 1.28 MB 002b0585e7daf51c3d929a92a83b98e5
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 19907ca364ed487bee8aa17e785e08a9
statistics/