Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/a815c0f5478895818d29d8180c2166a1e32137eacontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: a815c0f5478895818d29d8180c2166a1e32137ea
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GATGCATTCATCAGTA-930_D05, AGGATGTCACCTGTAA-930_D05, CTGTTGGAGGCGAATA-930_D05, GCGGTTATCTTAGGGT-930_D05, CTATGAGGTAAGCTTG-930_D05 (top 5 of 6207 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
a815c0f5478895818d29d8180c2166a1e32137ea.gz 2.33 GB 14f731ef82cf2e5fddfe0b0686a11e60
a815c0f5478895818d29d8180c2166a1e32137ea.gz.tbi 1.11 MB 43e5bb3f1a2c0b253c4ca948db31a705
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 6a67f724c772cfd3bf026460253aa054
statistics/