Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/acdb5ce99c02206bf9877de242b4b66508d93252content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: acdb5ce99c02206bf9877de242b4b66508d93252
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ACCAGGGAGCGATAAG-853_A07, AGTCAATGTAACGGGA-853_A07, GCGATTTAGCTTAACA-853_A07, AGAAGGTGTTGTGATG-853_A07, TATGGTCAGCAGGTGG-853_A07 (top 5 of 1649 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
acdb5ce99c02206bf9877de242b4b66508d93252.gz 706.18 MB 460d582ff16f5127b4558016e840144c
acdb5ce99c02206bf9877de242b4b66508d93252.gz.tbi 695.49 KB b62b21176048c745ccb39fbe35f89f79
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB d746b4bb1c4dbcf36925eeb0394e9164
statistics/