Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/b5b6a8b021a34e710250ed4c215b193e5c9a590bcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: b5b6a8b021a34e710250ed4c215b193e5c9a590b
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GAGGCTTGTCCTAATC-2229_B06, GACCTGCAGAGGAGTC-2229_B06, TGAAGGATCATCAGTA-2229_B06, AGTGCACGTGGTTAGC-2229_B06, AGCGGATAGCGGCTGT-2229_B06 (top 5 of 3989 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
b5b6a8b021a34e710250ed4c215b193e5c9a590b.gz 1.86 GB dc634126b7a547d6e73f3a4e576f6809
b5b6a8b021a34e710250ed4c215b193e5c9a590b.gz.tbi 1.02 MB 4daa69cefa57b2a97147978002078979
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 63e69ede886d7fb12f4dc4afe43f962b
statistics/