Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/b6b985ccdb0fde8b5356ddbc184087b1a88ae90ccontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: b6b985ccdb0fde8b5356ddbc184087b1a88ae90c
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GCGCGATTCAATGAGG-2479_B08, GCAATGTTCGAAGTGA-2479_B08, CTAAATGTCGGTTCCT-2479_B08, CATAGCTAGGTCCTAG-2479_B08, TGCTTGCTCATTTGCT-2479_B08 (top 5 of 3524 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
b6b985ccdb0fde8b5356ddbc184087b1a88ae90c.gz 1.79 GB 0e4663576f5d71ed10039a148d2be030
b6b985ccdb0fde8b5356ddbc184087b1a88ae90c.gz.tbi 1004.29 KB 1a31659f7b13e2a59971758db9487be1
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 9585488bc295923203ff037c867433d2
statistics/