Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/b7e4a8795f596fc59901316bfe7afcbd06b91b45content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: b7e4a8795f596fc59901316bfe7afcbd06b91b45
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell AGAACCGCAATAACCT-2357_E03, AGAGAAGCAGCATGGA-2357_E03, TGTCCTGGTTGTTCAC-2357_E03, GTTGTGAGTGTCCAAA-2357_E03, TTCAGTTTCCCTCTAA-2357_E03 (top 5 of 4204 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
b7e4a8795f596fc59901316bfe7afcbd06b91b45.gz 2.07 GB 3ab8afc81ab9dced6cacecc92d6fe4ed
b7e4a8795f596fc59901316bfe7afcbd06b91b45.gz.tbi 1.08 MB b5cb2c878957be7d7e0d7858eceb21a9
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 69f66b4ff830fdd5ad45741ecc79f5bb
statistics/