Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/ba7c3a612d8e316f481b34e3ce95341f9e5dff56content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: ba7c3a612d8e316f481b34e3ce95341f9e5dff56
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TTATCCTAGAGAAGGG-2233_B02, ACTTGCACAGGGAGCT-2233_B02, GTTTGCTGTTACTTCA-2233_B02, GCTTAGTAGTGGCGGA-2233_B02, ACGGTACGTTGGATAT-2233_B02 (top 5 of 6723 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
ba7c3a612d8e316f481b34e3ce95341f9e5dff56.gz 3.2 GB e4e16c3df1971389a6a9e5170e25eb28
ba7c3a612d8e316f481b34e3ce95341f9e5dff56.gz.tbi 1.36 MB 7bdd28aa913198fdf5263d3ed644c05e
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 185ab0e672eefd9d08151b432972df99
statistics/