Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/bab5b4c4910fa2eaac1b009541415a289c868f78content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: bab5b4c4910fa2eaac1b009541415a289c868f78
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CGTACGGGTTCATCTA-2471_A04, TCCTAGTGTGTTGCTT-2471_A04, GACTCACCAGAGGGAG-2471_A04, TTAAGTGTCTGTGCCT-2471_A04, GAAGCCTGTCACAGAC-2471_A04 (top 5 of 5331 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
bab5b4c4910fa2eaac1b009541415a289c868f78.gz 1.52 GB f6d0a706c26f3fe796cfa604219aafd4
bab5b4c4910fa2eaac1b009541415a289c868f78.gz.tbi 933.29 KB 816a7493b37824971be709750281ab84
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 696a4b0ed53aac79e8fae71159c9993d
statistics/