Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/bfc3295e69e7e7b19c7e1676e9b9cd28b2ee822ccontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: bfc3295e69e7e7b19c7e1676e9b9cd28b2ee822c
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TCACTGACAGGCTAGA-2368_F02, GTGCAAGCAATGAATG-2368_F02, CACAATATCCTCATCA-2368_F02, CGTGCACAGGATTTGC-2368_F02, TTTGCGGAGGTGAAGC-2368_F02 (top 5 of 4523 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
bfc3295e69e7e7b19c7e1676e9b9cd28b2ee822c.gz 2.6 GB c19fda02fcb37eea04d362c7c05a6eb7
bfc3295e69e7e7b19c7e1676e9b9cd28b2ee822c.gz.tbi 1.21 MB acb4708155b6bfa9d560fa781c0d6b4b
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 2306c2905a81d3b1c1a2b6cb27a064df
statistics/