Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/c570876fa4a9fac69a6f5513f87a8fd63b86eaa4content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: c570876fa4a9fac69a6f5513f87a8fd63b86eaa4
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TTAAGGTGTCCGTGAG-891_A06, TGAAACTGTTGCGCGA-891_A06, TCCAGGTCAAGGAATC-891_A06, CGAATCTAGCTGCACA-891_A06, AAGCTATGTGTAACCA-891_A06 (top 5 of 1816 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
c570876fa4a9fac69a6f5513f87a8fd63b86eaa4.gz 980.64 MB be0ba436eaf842e17ece9724b6e087b7
c570876fa4a9fac69a6f5513f87a8fd63b86eaa4.gz.tbi 774.56 KB 6d9ddd692f0b50b1d5663ca313925526
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 00f7417aff636729b2014c29c1dbdec0
statistics/