Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/d07be4112755aee6622fcfe39d261d9daff374e1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: d07be4112755aee6622fcfe39d261d9daff374e1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GGAGCAAGTTTGAGGC-1036_B03, CCAGACTCACCTATAG-1036_B03, CGAGCGAAGGATGATG-1036_B03, CGTTAGTAGCCTCTCG-1036_B03, CGACAAGCAAGCGAGC-1036_B03 (top 5 of 6726 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
d07be4112755aee6622fcfe39d261d9daff374e1.gz 3.19 GB 2f85d945f216feefb0819f7e7876035d
d07be4112755aee6622fcfe39d261d9daff374e1.gz.tbi 1.34 MB 6464a3eca61379199cee5436afe92506
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 0ba9b7526bfde57ebaa365bf3f312cad
statistics/