Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/d2e2cc6e670103848c1a8dd9272297992452501acontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: d2e2cc6e670103848c1a8dd9272297992452501a
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CGCGGATTCTAGCGAT-2453_A02, CGGATTAGTATTGGAT-2453_A02, GAGGTAGGTGTTGTGA-2453_A02, ACCAGGGAGGCTAGAA-2453_A02, CAATATGTCGAAGTGA-2453_A02 (top 5 of 3169 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
d2e2cc6e670103848c1a8dd9272297992452501a.gz 1.6 GB 3a18dd085dc512c60f3ce115b9eff783
d2e2cc6e670103848c1a8dd9272297992452501a.gz.tbi 961.11 KB 15f4d26c36ec7a42b17f1661a6ed276d
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB ed1e167fa41b810bd491e70b66f3f6ca
statistics/