Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/d7924909ac635d27a5aaf99c11ea0373b9c3bb07content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: d7924909ac635d27a5aaf99c11ea0373b9c3bb07
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CGTGTTACACCCACCT-1959_C02, TACGGTTAGATTGAGG-1959_C02, GACAATACAAGGCCAA-1959_C02, CTTGTAAAGGAGGTTA-1959_C02, CATAACGGTTACTTCA-1959_C02 (top 5 of 7290 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
d7924909ac635d27a5aaf99c11ea0373b9c3bb07.gz 2.07 GB aa1d7b9c4498dae72e4a0a1906966797
d7924909ac635d27a5aaf99c11ea0373b9c3bb07.gz.tbi 1.06 MB 11b1ba52196d1fb0bb78716da23859d5
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 6c779d45214f93d4c7d05b62f7f8bc99
statistics/