Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/d796b86685dfc58f3d1e1826d00a6c211ddb25f9content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: d796b86685dfc58f3d1e1826d00a6c211ddb25f9
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ACCGAAGCATTGTGGC-930_C05, GCATCCTTCCCTGTTA-930_C05, GTATTGCAGGTCAAAG-930_C05, ACCAGGGAGGTCCAAT-930_C05, GGCTGAGAGCACGATT-930_C05 (top 5 of 4648 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
d796b86685dfc58f3d1e1826d00a6c211ddb25f9.gz 2.01 GB 9ec02bebc236e73066672ac0bb77a973
d796b86685dfc58f3d1e1826d00a6c211ddb25f9.gz.tbi 1.03 MB e3c08b020ef3537659906104a68db3a4
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB a8ea0a0ea47ef7339ef504a752551fa9
statistics/