Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/dd8682eb58852809b61ca6017fa4b3a8dbda16a3content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: dd8682eb58852809b61ca6017fa4b3a8dbda16a3
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GGTACCGGTTAGGCTA-2006_A05, AGTTGCGTCGCAGGCT-2006_A05, GTCCGTAAGGCCTAAT-2006_A05, AATCCCTGTCAGTAAT-2006_A05, GGTTGAGCACGTGCTG-2006_A05 (top 5 of 5870 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
dd8682eb58852809b61ca6017fa4b3a8dbda16a3.gz 3.17 GB 0256ab3f2c5900f323955cd7ae218acb
dd8682eb58852809b61ca6017fa4b3a8dbda16a3.gz.tbi 1.37 MB 785f2b5481ccbfa9a506a5e21f647252
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 2aa0654f91668393bbe2360a3337efbb
statistics/