Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/e36477f7fbb1273c15d069c113a228b085330e0dcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: e36477f7fbb1273c15d069c113a228b085330e0d
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CAATCTAAGCGTGCGT-2306_B02, AGTCAAGAGAGGAGGA-2306_B02, AGTGCACGTTTACCGT-2306_B02, ATAGATGCATCCAGGT-2306_B02, GAGGTGAGTTCAAGCA-2306_B02 (top 5 of 3647 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
e36477f7fbb1273c15d069c113a228b085330e0d.gz 2.01 GB 99318513e2762750b3529b30923fd5cd
e36477f7fbb1273c15d069c113a228b085330e0d.gz.tbi 1.06 MB 456f9031f16b16fbcff29d49a0276f28
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 1e3a95a7735b86f0496bff71fc83022c
statistics/