Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/e456fb21c07a1c8214dba147a7457ebb5965deeccontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: e456fb21c07a1c8214dba147a7457ebb5965deec
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TCAATCGCATGAATAG-2370_B03, CGAAGTAAGTTTGCGG-2370_B03, AGGATGCAGTATCGCG-2370_B03, ACATCATCATGGCCCA-2370_B03, GAAACTGAGAAGGTGC-2370_B03 (top 5 of 5607 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
e456fb21c07a1c8214dba147a7457ebb5965deec.gz 2.9 GB 9fa28278e73e203c44f47e99368640d5
e456fb21c07a1c8214dba147a7457ebb5965deec.gz.tbi 1.3 MB 2c4ca0befffe1cc391ca10b5566b29f0
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB a23ea80eeb8847b715bf5a1b930daf14
statistics/