Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/e4edd9614b130153b0c227ac29f33463bc482ea3content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: e4edd9614b130153b0c227ac29f33463bc482ea3
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GGGATTAAGCGCAATT-2513_B04, GAGTGATCAGACAAAC-2513_B04, GTTAGACTCATTAGTG-2513_B04, GGATGAATCGCTAAGT-2513_B04, AAGGATCCATGTTTGG-2513_B04 (top 5 of 4237 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
e4edd9614b130153b0c227ac29f33463bc482ea3.gz 2.03 GB 576dfac7664409d46afff6d4e7f84be7
e4edd9614b130153b0c227ac29f33463bc482ea3.gz.tbi 1.07 MB 4085846aa661d967a3c71317fbd17ea9
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB ed972a716c2d29123a339e5029754908
statistics/