Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/e67331484419894e2ba3738741d020acdcf4f89econtent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: e67331484419894e2ba3738741d020acdcf4f89e
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TCGCATTGTCCCGGAA-2531_A03, TACCTTTAGCGGATAA-2531_A03, CCAAGGCTCATTTGTC-2531_A03, GATTGCGTCTGGTCCT-2531_A03, GATCACTAGCTATATG-2531_A03 (top 5 of 2901 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
e67331484419894e2ba3738741d020acdcf4f89e.gz 1.53 GB b7ce61f951dc299f31a779f27c514bf6
e67331484419894e2ba3738741d020acdcf4f89e.gz.tbi 948.06 KB 99376c3e57548434d0a18ce4092141ff
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 0148d2831f37a085541104e33275eba7
statistics/