Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/ed5e6e86877a006e136d88a45ef91280c0e1c025content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: ed5e6e86877a006e136d88a45ef91280c0e1c025
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGGTAAACACACAATT-2479_A08, TTCAGCACAATAACCT-2479_A08, TTTCACCCATTGTGGC-2479_A08, GGTTGCGGTGCGCGTA-2479_A08, ATCTATGAGGTCCGTA-2479_A08 (top 5 of 3921 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
ed5e6e86877a006e136d88a45ef91280c0e1c025.gz 1.99 GB bc4355b29539818ff643539c9b5a5208
ed5e6e86877a006e136d88a45ef91280c0e1c025.gz.tbi 1.03 MB f95aae876a55646fd5e66d81671a5a69
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB c2c889459451bc74eee8035c09edcdab
statistics/