Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/ed85f8bc13e2abf1c7305bc289f4687f8f600332content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: ed85f8bc13e2abf1c7305bc289f4687f8f600332
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GGAACTAAGGCTGTCA-853_B07, GAGGCCTTCCGCCTCA-853_B07, TAGCAGGCAACTAGAA-853_B07, TGGACAAAGTTATCCT-853_B07, AGCGCCTAGCATTATG-853_B07 (top 5 of 2520 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
ed85f8bc13e2abf1c7305bc289f4687f8f600332.gz 1.37 GB 93e9cdbcaa9bf263d3878fcfeaeb63ee
ed85f8bc13e2abf1c7305bc289f4687f8f600332.gz.tbi 891.09 KB 4e88a8e1350ceb193d466ee549180929
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 433b96073bb8d66cb5bd8bd11f1f1240
statistics/