Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/eee22f2599f81ad166aee7f7edac2bbc48a206e0content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: eee22f2599f81ad166aee7f7edac2bbc48a206e0
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ATGACGAAGCTGGACC-2530_B02, GGACATAAGCAACATC-2530_B02, TTGGGCCAGACAAACG-2530_B02, GTTACTAAGCCTGTTC-2530_B02, TTAAGGTGTTGCAATG-2530_B02 (top 5 of 3189 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
eee22f2599f81ad166aee7f7edac2bbc48a206e0.gz 2.13 GB 5bb427f3417fa9214691d3d1a20ddc47
eee22f2599f81ad166aee7f7edac2bbc48a206e0.gz.tbi 1.09 MB 8361810f527a339a8ab17b87fb8d1108
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 7382821d7812709342eef0f5ed2a0808
statistics/