Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/f811d64355949c750b99e65c026a632ffbd59fd6content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: f811d64355949c750b99e65c026a632ffbd59fd6
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GAGTGTTTCCTCCTAA-847_C04, GTCTAACAGGAGCACG-847_C04, GGACGGATCCGGTATG-847_C04, GGAGGTTAGGCGTAAA-847_C04, ATGGACAAGTTATCCT-847_C04 (top 5 of 2437 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
f811d64355949c750b99e65c026a632ffbd59fd6.gz 1.6 GB 48a4e702de7f7ca7c3650418abc3da12
f811d64355949c750b99e65c026a632ffbd59fd6.gz.tbi 958.26 KB 1681dd21f1ac2f685d8ecb6124dd11f4
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 1bc8e49382abddf1423c836e74f3c1fc
statistics/