Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/f877364159caef08621ea201e7a6ab3185712fe7content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: f877364159caef08621ea201e7a6ab3185712fe7
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GACCTAAGTGCGCATG-2447_B06, GGTTGAGCAGTCTATG-2447_B06, CCGTTAACATCCCTCA-2447_B06, TATGGCCCATCTAGCA-2447_B06, CGCTTGCGTTGCGCGA-2447_B06 (top 5 of 4530 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
f877364159caef08621ea201e7a6ab3185712fe7.gz 1.97 GB 67092ae281b51c38ce263bbaaa856091
f877364159caef08621ea201e7a6ab3185712fe7.gz.tbi 1.04 MB fb7c9712a01cd9628a8b80f3d4eb5f9a
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB da9577525bef211d0824d57ef372e937
statistics/