Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/fc2d7337489a75e69c9d5c1c181a2e2775138509content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: fc2d7337489a75e69c9d5c1c181a2e2775138509
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CCAGCTGCAACTAGAA-2540_C02, TTTGTGAAGCGAGGTG-2540_C02, TCAAGACTCGGTTACG-2540_C02, CGCAATAGTGGACCTG-2540_C02, GTCGGTTCACATTAAC-2540_C02 (top 5 of 2953 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
fc2d7337489a75e69c9d5c1c181a2e2775138509.gz 1.57 GB 64d27f9712f9bbcbdd27a00a1f74cd0e
fc2d7337489a75e69c9d5c1c181a2e2775138509.gz.tbi 960.75 KB 4dd183943143ef59145ba73cee1073cc
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB ae32b66c20ef5c20f7ec83f43dfa6f47
statistics/