Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/02954e706ebfe8bfdcaf2e40913026fe3595962bcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 02954e706ebfe8bfdcaf2e40913026fe3595962b
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CCGCAAATCTCACACC-1, ATAAGTCGTGCTCCGT-1, GGGTGTTGTTCCGGCT-1, GCCTGTGCAGTTATGT-1, GAAGTATAGGATGATG-1 (top 5 of 5969 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
02954e706ebfe8bfdcaf2e40913026fe3595962b.gz 2.54 GB ee5aaea294863d0764b86392d9d385b9
02954e706ebfe8bfdcaf2e40913026fe3595962b.gz.tbi 1.15 MB ce80326ba59bf6bfcbb847ee85b55838
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB e976c838f2eb556f36ded2a5947b1a05
statistics/