Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/05335d335445f7f61286864bacaa2e31e0d212e8content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 05335d335445f7f61286864bacaa2e31e0d212e8
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGAGGAGGTTCAAGCA-1, GTGAGGAGTGTCCAAA-1, ATTGGCTAGGAGCAAC-1, CACTTAAAGAGAGGAG-1, CAAGCTAGTCATGAGC-1 (top 5 of 3527 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
05335d335445f7f61286864bacaa2e31e0d212e8.gz 1.29 GB b69478b9c316e9eebeb8528264de6127
05335d335445f7f61286864bacaa2e31e0d212e8.gz.tbi 860.39 KB 807001f95b4383fa5b46ecc2f30ab14c
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 6c96a15771121f7f8924990c4ae3404e
statistics/