Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/08be56aa4ea32148becebe57e278cc5822627416content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 08be56aa4ea32148becebe57e278cc5822627416
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CCTTTAGTCGTTACAA-1, GACTCACCACAATGTT-1, CGTAGCGGTGAATCGC-1, GAAGGAACATTAGGCC-1, CATCGCTTCTTGCAGG-1 (top 5 of 1771 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
08be56aa4ea32148becebe57e278cc5822627416.gz 701.21 MB f343ffc81a874ed69949f46379441d92
08be56aa4ea32148becebe57e278cc5822627416.gz.tbi 685.31 KB 0edf9804c4749726a7c771c3d3276301
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 423d61e78bb3867e8b99f737e9bd22e4
statistics/