Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/0a6e30623d6136daa72a7155f6db26cb4aba8ec5content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 0a6e30623d6136daa72a7155f6db26cb4aba8ec5
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TCCAGGATCGCTCCAT-1, GCTTATCGTCGTAAAT-1, TTTACGCGTGTTTGTC-1, GCTGCAATCTCACAAA-1, TTTAAGGTCCCATAAA-1 (top 5 of 10055 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
0a6e30623d6136daa72a7155f6db26cb4aba8ec5.gz 4.34 GB e0cde6a4997a93a40337a3b48f34509c
0a6e30623d6136daa72a7155f6db26cb4aba8ec5.gz.tbi 1.57 MB e6e40285b161d14babf944e973e2b456
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB e7f30e5b9e2512f6103eec995e536432
statistics/