Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/0cac73b6e5f54f68d219e6e1449ad26964c65fd6content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 0cac73b6e5f54f68d219e6e1449ad26964c65fd6
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TATGGGCGTGTCCAGG-1, GCTTTGTGTGTCACGG-1, ATGACCAGTAACGGGA-1, TGTCCTGGTTGTTGGA-1, TAGTGTGGTTAGGCGT-1 (top 5 of 4271 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
0cac73b6e5f54f68d219e6e1449ad26964c65fd6.gz 2.68 GB 91ddcfe08d6e89c41240bf06777374b3
0cac73b6e5f54f68d219e6e1449ad26964c65fd6.gz.tbi 1.19 MB 29ea6b033186c4414702b27dfed8a4e6
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 8ffbebe11982298e48353c6a03e29fcc
statistics/