Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/11f2dde1ce453f243ebabe3cf0459772270a3513content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 11f2dde1ce453f243ebabe3cf0459772270a3513
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CAGTACCCACCGGTAT-1, TCAAGGAAGACACTTA-1, GTCCTCCCAAACGGGC-1, AGAAGGTGTTATCGAG-1, GTCCTCCCATTCCTCG-1 (top 5 of 4936 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
11f2dde1ce453f243ebabe3cf0459772270a3513.gz 2.52 GB bdeba886e1679ad607a1587bca569be5
11f2dde1ce453f243ebabe3cf0459772270a3513.gz.tbi 1.16 MB 8750985aadb331641e01a78356767a80
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB afa6a2bd219f6ee459fb67c057c6c481
statistics/