Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/12a27af9df8b91c8735fd6bade941cca75c68155content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 12a27af9df8b91c8735fd6bade941cca75c68155
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CAAACGCGTCATGCAA-1, GGTCAATTCTTTGAGA-1, GCGGGTTTCATTGCGG-1, ATCCGTGAGTAAGGGC-1, CTGCAATAGGTCGATT-1 (top 5 of 2126 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
12a27af9df8b91c8735fd6bade941cca75c68155.gz 697.37 MB d837a8d4f4bed872e2c63bcc64922be3
12a27af9df8b91c8735fd6bade941cca75c68155.gz.tbi 685.93 KB 5a02df63ba65a6b60efade9ce95a22bf
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB b5ce2ad253822fb119ec04aca75e0c85
statistics/