Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/153c33b889ac96179256ee8e2c1d8114445e9395content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 153c33b889ac96179256ee8e2c1d8114445e9395
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGGTTCTGTCACCAAA-1, CGTGACATCAGTTCCC-1, ATGACGAAGAGCCGCT-1, AATTTGCCATTGCAGC-1, ACAGTATGTCACACCC-1 (top 5 of 5374 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
153c33b889ac96179256ee8e2c1d8114445e9395.gz 2.42 GB 6bf8e3e101cc7222e977e2fb738b9ef7
153c33b889ac96179256ee8e2c1d8114445e9395.gz.tbi 1.14 MB 6fa0e5a7e9b91530f8883423289ad5f2
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 01b88d98729f181ea1f4dfe5c22206f7
statistics/