Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/167f168e2a7b4ace846f1eb9c3d006c7ffd19004content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 167f168e2a7b4ace846f1eb9c3d006c7ffd19004
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TACTCAAAGTGAAGTG-1, AATAACCGTGCCGCAA-1, TGGATTGGTAAACAAG-1, TATCGCGAGAACCTGT-1, GCTAGCCAGGGTCTAT-1 (top 5 of 4611 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
167f168e2a7b4ace846f1eb9c3d006c7ffd19004.gz 2.73 GB df70de3a5889f077077a7b78d177b465
167f168e2a7b4ace846f1eb9c3d006c7ffd19004.gz.tbi 1.23 MB 54f077d6d132ff8601b1fd89f4181eca
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB e5eb96f8d16a43590c373534ad63ebd0
statistics/