Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/1883e72621e75bb259f457c64eb529b322c86630content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 1883e72621e75bb259f457c64eb529b322c86630
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell AACAAGCCAGGAACTG-1, AGTTTGCAGTAGCTTA-1, TAACCGGTCCTCACTA-1, CAAAGCGCACTAGCGT-1, CGAAGCGAGTCAATTG-1 (top 5 of 6432 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
1883e72621e75bb259f457c64eb529b322c86630.gz 2.55 GB b4d1eff3151a2a6a13adf6f7ab7c5884
1883e72621e75bb259f457c64eb529b322c86630.gz.tbi 1.18 MB 384d75de07930c7b6a5ff2cdff6f569e
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 20f8c670d3fa883e684ffb4084b1a79e
statistics/