Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/1a4af6136f82c7316e801b9afd9851a40036a984content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 1a4af6136f82c7316e801b9afd9851a40036a984
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CTGTACCTCTGCAACG-1, GACACCGGTTGCATCT-1, AGGTTACTCCTAGTCC-1, TGCAGGCTCCGGGACT-1, CTAAGGTTCGGTTCCT-1 (top 5 of 1697 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
1a4af6136f82c7316e801b9afd9851a40036a984.gz 843.64 MB bf83db117a3799d27929873d3e5c7c30
1a4af6136f82c7316e801b9afd9851a40036a984.gz.tbi 737.58 KB 475be6acae7b42a950c945b44d31c23d
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB f39dcc81916c41255040d543544b0286
statistics/