Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/1ab73e9c3d2154ea04c1c06cabe46d93b5be2969content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 1ab73e9c3d2154ea04c1c06cabe46d93b5be2969
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CCTGATGAGGAAGCAC-1, ATTTAGCCATTGCAGC-1, AGAAACTAGCGCCTAA-1, TAGAGCCGTTGCGCGA-1, TGTTGGCCAGGCTTCG-1 (top 5 of 6978 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
1ab73e9c3d2154ea04c1c06cabe46d93b5be2969.gz 2.89 GB a84d02c7caf4f32c7410ca622ce77d4f
1ab73e9c3d2154ea04c1c06cabe46d93b5be2969.gz.tbi 1.24 MB ee3fe3d1e935c1200f5849e2761d4b77
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 9e56c79b2eb20e6124c681c4b0732a15
statistics/