Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/1be90b8899a22aeb17022c5d683646fdd1043574content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 1be90b8899a22aeb17022c5d683646fdd1043574
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ATGTCATCATGATTGT-1, AACCTAATCGATTATG-1, GTCTTTGTCGTTATAG-1, CAGCTAAGTCAGGCAT-1, TACTTGTTCACCGGTA-1 (top 5 of 8058 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
1be90b8899a22aeb17022c5d683646fdd1043574.gz 2.04 GB 9ef86d4239fef9dcb4917b6fc724eddf
1be90b8899a22aeb17022c5d683646fdd1043574.gz.tbi 1.05 MB 17576d794f5be913a423be13a6a3fcbd
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB fc2af0b11a07e6d2b33a94d7a571d5d0
statistics/