Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/2384f346add7830e4d8f393f78ec0bce99721f62content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 2384f346add7830e4d8f393f78ec0bce99721f62
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TATTCGTTCGTTAACA-1, TATGTGATCCTCAGTC-1, GTGGCTTCATCCCTCA-1, GAGCTGCTCTTTAGGA-1, GAGTATCTCTAGCGTG-1 (top 5 of 2391 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
2384f346add7830e4d8f393f78ec0bce99721f62.gz 1.01 GB 9eaf91abb143ab018aebed084eac518f
2384f346add7830e4d8f393f78ec0bce99721f62.gz.tbi 790.78 KB 8e5bbc12ddeeff714f07831d2eca0f14
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 11548bac5e24835750c7e28e4774a02d
statistics/