Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/24ff39ab46f5096da374d868feac405470ae60abcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 24ff39ab46f5096da374d868feac405470ae60ab
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GGGTGTTGTTTGAGGC-1, TGTCAATCACCTGGTG-1, CGCACAATCGGCTATG-1, CGGAGCAAGCTAAGTC-1, CCCTGTTAGCCTGAGC-1 (top 5 of 8977 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
24ff39ab46f5096da374d868feac405470ae60ab.gz 2.55 GB 51128cea354a2d02790ed85d9a92de62
24ff39ab46f5096da374d868feac405470ae60ab.gz.tbi 1.17 MB 7f0782fbc5f9fa26036c8437075375ea
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 742c718f7ba0a044d8abcd02023f8377
statistics/