Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/2f3d127b527f92e64d4fc596b6fee3bdd550136fcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 2f3d127b527f92e64d4fc596b6fee3bdd550136f
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TCGTAATCAACTAGCC-1, GGCTTCAAGCACAGGG-1, CCAATATCATTGGGAG-1, AATTGGGAGTTCCCAC-1, GAGCTGCTCTGTGAGT-1 (top 5 of 4839 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
2f3d127b527f92e64d4fc596b6fee3bdd550136f.gz 1.84 GB 02f61d0fc9aa8e5baf861396c79abd6c
2f3d127b527f92e64d4fc596b6fee3bdd550136f.gz.tbi 1019.18 KB 6225afd282e415d496264faf2835fe4d
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 749479eb65ee588a963e4eec90690742
statistics/